Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870165.1_cds_XP_016433983.1_30085
CDS Infomation

[gene=LOC107760449] [db_xref=GeneID:107760449] [protein=chloride channel protein CLC-f-like isoform X2] [protein_id=XP_016433983.1] [location=complement(join(24003..24084,25015..25247,25386..25598,25777..26010,28918..29022,29132..29586,31146..31340,32097..32499,33046..33375))] [gbkey=CDS]
Sequence

ATGTCGGGAGGCGAGTACGATCACAACGTTTTATTACGTTCTACTTCATCGGCGTCAGAA
GGCGATTTAGAAAGCCAGTCGCCGAGGAGAACGAATACCAGAAGCTTTAAGGATCTATTA
AAGCGGTTGGATCGAGGTTTTTCGGGTCGGCGATCATGTGATATAAAGCGATCAGATAGG
GACCAAAACTCGTCGTCTTCTCCTTCTTCTAATCGCGGTGTTTCGGATGAAATTCTCGGC
GATAGTGCTCCGCCGGAATGGGCGATGTTGCTTGTTGGATGTCTCCTTGGCCTTGCTACT
GGCCTTTGTGTTGCCGCCTTTAACCGCGGGGTACACGTAATACACGAGTGGGCGTGGGCT
GGTACTCCTAACGATGGTGCTGCTTGGCTTCGTTTGCAAAGACTAGCTGATACTTGGCAC
CGGATACTTTTAATACCAGTTCTGGGTGGAGTCATTGTTGGCATGCTGCATGGTCTGCTT
GAAATATTGGACCAAATAACACAGTCCAGTTCTTCTCAGGGACAAGGATTTGATTTGATT
GCTGGAATCTTCCCTACAGTGAAGGCCATTCAGGCTGCTATAACTCTAGGTACTGGTTGT
TCTTTGGGTCCTGAAGGCCCTAGTGTAGATATTGGGAAGTCATGTGCCTATGGATGCTCA
GTGATGATGGAAAACAACCGGGAAAGAAGAATAGCTCTTATTGCAGCTGGTGCAGCTGCT
GGAATTGCTTCAGGTTTCAATGCAGCGGTAGCGGGTTCTTTCTTTGCGATTGAAACAGTT
TTAAGACCACTCCGTGCAGAAAATTCACCCCCATTTACAACTGCAATGATCATATTGGCT
TCTGTTATATCATCAACTGTATCAAATGCAGTACTTGGAGAGAAACAGGCTTTCACAGTG
CCCACGTATGATATGAAATCTGCTGCTGAGCTTCCATTGTATCTGATACTGGGGATGCTG
TGTGGAGTGGTAAGTGTGGCTTTCACTCGATTGGTGTCCTGGTTCACCAAGGGGTTTCAG
TTCCTCAAGGAAAAATTTGGACTTTCTGATGTTGTCTGCCCTGCCTTGGGGGGTTTAGGA
GCTGGTGTAATAGCTCTTAGATATCCTGGAATTCTCTATTGGGGTTTCACTAATGTTGAT
GAAATCCTTCATACTGGGAAGACTGCATCTGCACCTGGAATCGGATTGCTAGCCCAATTA
GTTGCTGCTAAAGTCGTGGCCACTGCTTTGTGCAAAGGGTCTGGCCTTGTTGGTGGATTG
TATGCACCAAGTTTAATGATAGGTGCTGCTGTAGGTGCTGTATTTGGAGGGCTAGCTGGG
GAACTTATAAATTCAGCTATTCCAGGGAATGCTGCTATTGCTCAGCCACAGGCATATGCA
CTGGTGGGAATGGCTGCTACACTAGCTTCCGTTTGCTCAGTGCCTTTGACTTCAGTGCTC
TTATTGTTTGAGTTGACAAAAGATTATAGAATTTTGCTTCCTCTCATGGGTGCTGTTGGA
CTGGCAATATGGGTGCCTTCTGTTACAGACCAGCCAAAGGAAACGGATGTATCAGAAGCG
AAGTTTGCATCAAAAGGATACTCAATTCTTTCACCAGTTGAGAAAAATGAAGGGAATGTT
CCGAGGAAATCTGGTGAGGGAAATGACTTGGAACTATTGGTGATTGGGAGTCATAATAGT
CGTGAATCATTTGATGAAGGTCTCATTCTGGAAGATCTAAAGGTTTCTCAGGCCATGTCA
AATGATTATTTGAAGGTCTCTCCGAGCCAAAATGTGAAAGAAGCTTTAGAGTGCATGCAT
GACGGCCAACAGAGTTGCGTTATTGTGGTTGGTGCTGAAGGTTATTTGGAAGGAATTCTA
ACATATGCTGACGTCAAAAGAAGTTTGTTTAAGAGCCATGGGGATTCTTCTAACAGTGAT
TTATCAGTCACGGATGCAAATACTTGTCTTGTGTCCTCTATATGCACAAGAGGAATAAGC
TATCGTGGCCAAGATTGTGGACTCCTAACTTGTTATCCTGATACGGATCTAGCAACTGCA
AAGCAACTAATGGAGGCCAAAGGAATTAAGCAATTGCCTGTGGTCAAACGTGGTGGAGAA
TTCAGAAGAGAAAGAAAGCGCAGAATTATTGCTATTCTGCGTTATGATTCAATAGAGGAG
TCAATCAGGAGTGAAGTGAGTCGCCGAAAGTCGGTCTACCAGCAGAGTGAAGAAGATAAT
GACAAGCACATTGTAACAAATGGCCATTAA

Peptide Sequence

PEP ID

XP_016433983.1
PEP Infomation

PREDICTED: chloride channel protein CLC-f-like isoform X2 [Nicotiana tabacum]
Sequence

MSGGEYDHNVLLRSTSSASEGDLESQSPRRTNTRSFKDLLKRLDRGFSGRRSCDIKRSDR
DQNSSSSPSSNRGVSDEILGDSAPPEWAMLLVGCLLGLATGLCVAAFNRGVHVIHEWAWA
GTPNDGAAWLRLQRLADTWHRILLIPVLGGVIVGMLHGLLEILDQITQSSSSQGQGFDLI
AGIFPTVKAIQAAITLGTGCSLGPEGPSVDIGKSCAYGCSVMMENNRERRIALIAAGAAA
GIASGFNAAVAGSFFAIETVLRPLRAENSPPFTTAMIILASVISSTVSNAVLGEKQAFTV
PTYDMKSAAELPLYLILGMLCGVVSVAFTRLVSWFTKGFQFLKEKFGLSDVVCPALGGLG
AGVIALRYPGILYWGFTNVDEILHTGKTASAPGIGLLAQLVAAKVVATALCKGSGLVGGL
YAPSLMIGAAVGAVFGGLAGELINSAIPGNAAIAQPQAYALVGMAATLASVCSVPLTSVL
LLFELTKDYRILLPLMGAVGLAIWVPSVTDQPKETDVSEAKFASKGYSILSPVEKNEGNV
PRKSGEGNDLELLVIGSHNSRESFDEGLILEDLKVSQAMSNDYLKVSPSQNVKEALECMH
DGQQSCVIVVGAEGYLEGILTYADVKRSLFKSHGDSSNSDLSVTDANTCLVSSICTRGIS
YRGQDCGLLTCYPDTDLATAKQLMEAKGIKQLPVVKRGGEFRRERKRRIIAILRYDSIEE
SIRSEVSRRKSVYQQSEEDNDKHIVTNGH

Transcript Sequence

Gene sequence data has not been registered.